Insertion junction: CLIP2.007535_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007535
Chromosome:chromosome 16
Location:3074509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664350 CLD1 (1 of 1) PTHR10992//PTHR10992:SF752 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // ALPHA/BETA-HYDROLASE-LIKE PROTEIN; Putative Chlorophyll dephytylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTGGTAAGCCTGTAGCCTCTGGCCCCGTACACGGTGCTAGACTCCAA
Internal bar code:TTCAGTGGCGTCTGATAGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2891
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTATGCGATGCAGGCTTG
Suggested primer 2:GCAAAAATGCAGGCCCTTCA