Insertion junction: CLIP2.007539_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007539
Chromosome:chromosome 6
Location:8530660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800755 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATATGAAGTGCCGACGTAACAGCAGGAACATACATGGGGGTTTAGGG
Internal bar code:TGTTTTCTCGTAGTAACTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1735
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGTGGAAGATGGCGAT
Suggested primer 2:GCACATCGCATACACGTCAC