Insertion junction: CLIP2.007564_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007564
Chromosome:chromosome 2
Location:3631373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099850 PDC2 (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC; Pyruvate dehydrogenase, E1 component, alpha subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACTGCATTTTGCCGAACCTGCAGCCAGGCGAGACAGCGGTCCGTTAG
Internal bar code:TGTAGTCTACCTCCGCGTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:959
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCTGGTTTGAGCACAAG
Suggested primer 2:CGATGGGCGACTTAGAGGTC