Insertion junction: CLIP2.007567_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007567
Chromosome:plastome
Location:13052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802267 ChreCp005,2716979,tufA elongation factor 1-alpha; (1 of 1) PTHR23115//PTHR23115:SF146 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGTTTGGGTATAAAATATAATACACTCAACATGTAACTATTATTTAGC
Internal bar code:GACCTAGTAGCGGCATGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:78
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AACAACAGAAGAGCTCGGGG
Suggested primer 2:TTAACGGACGTCCCCTTTGG