Insertion cassette: | CIB2 |
Side of cassette: | 3' |
Strand: | + |
Strain: | CLIP2.007570 |
Chromosome: | chromosome 16 |
Location: | 5891617 |
Confidence (%): | 63 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre16.g679300 | CGL139 | Conserved in the Green Lineage | 3'UTR |
Cre16.g679350 | (1 of 3) IPR003131//IPR011333 - Potassium channel tetramerisation-type BTB domain // POZ domain | 3'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TCAATGGGTCGGTGACTCCGTGTACGTCACTGCCTCACATCCTCCCTACG |
Internal bar code: | CTTGCTGTCCAACAGAACGGGC |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 730 |
LEAP-Seq percent confirming: | 55.5556 |
LEAP-Seq n confirming: | 5 |
LEAP-Seq n nonconfirming: | 4 |
LEAP-Seq n unique pos: | 9 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | CACCTACCGTATCACTGCCC |
Suggested primer 2: | CTGGGCGCCATTCTAAAGGA |