Insertion junction: CLIP2.007581_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007581
Chromosome:chromosome 7
Location:6127451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355700 (1 of 1) PTHR23329//PTHR23329:SF2 - TUFTELIN-INTERACTING PROTEIN 11-RELATED // ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN 3'UTR
Cre07.g355750 (1 of 1) IPR001680//IPR001810//IPR017986//IPR020472 - WD40 repeat // F-box domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTTGTGATGTTGACTGCCGAGGGCGAAGCCGGGACCACACAAGCCCT
Internal bar code:GGTTGTACCCTGTTTTACTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1122
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGCACAGAAGAAGTGGA
Suggested primer 2:AACGCTGTCATCACGTTTGC