Insertion junction: CLIP2.007582_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007582
Chromosome:chromosome 9
Location:5317759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407501 (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGGCAAACCTCTTTCTATGGGCCCACGGCGAGTGTGGAAAGCTTGCG
Internal bar code:GTGGGGGACCCGCCGGCTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2127
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCACGACGCACTTCAAT
Suggested primer 2:CAGTTGCATAGCGAGCGTTC