Insertion junction: CLIP2.007589_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007589
Chromosome:chromosome 12
Location:9271055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542569 (1 of 4) PF00497 - Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGAAGTGCTTGCGTGGTCATCGGGTGGGGCGTGAGGCGTGTGTCAGC
Internal bar code:GTATTGTTCTGCTCCATTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2469
LEAP-Seq percent confirming:79.5455
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTCATCCTCCTCCTCTT
Suggested primer 2:CGCTACCCCACACGTATCTC