Insertion junction: CLIP2.007591_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007591
Chromosome:chromosome 16
Location:5891596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679300 CGL139 Conserved in the Green Lineage 3'UTR
Cre16.g679350 (1 of 3) IPR003131//IPR011333 - Potassium channel tetramerisation-type BTB domain // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCGGTCCCCGCAAGAGTCTCAATGGGTCGGTGACTCCGTGTACGTCA
Internal bar code:AAAGATACCAAGCTCTTATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTACCGTATCACTGCCC
Suggested primer 2:CTGGGCGCCATTCTAAAGGA