Insertion junction: CLIP2.007596_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007596
Chromosome:chromosome 6
Location:5884763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289600 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre06.g289650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACATGAGACCAACAACAGTGGTCCCCGGATACGCGCGCACTGCTGGC
Internal bar code:CCCAGCCGAGGACTCATACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5175
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTGCGCCTTGGTACTTT
Suggested primer 2:ACCATGAACAAACGCACAGC