Insertion junction: CLIP2.007624_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007624
Chromosome:chromosome 3
Location:144249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143947 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACCGCACCCGCATCAAAGAGGTGGGTGGCTGGGTGTGTGCGCTCGCG
Internal bar code:TTTCCGGTGAGCCTGGTAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1789
LEAP-Seq percent confirming:88.4058
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCTTGATCGCGATGTGC
Suggested primer 2:AAACCGCACCTACTAAGCCC