Insertion junction: CLIP2.007627_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007627
Chromosome:chromosome 7
Location:4075653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340650 CGL149 Conserved in the Green Lineage; (1 of 1) PF09430 - Protein of unknown function (DUF2012) (DUF2012) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACCCAGTTGCCGCCTTCCGCCCCTTTCCCCTCTCCCCTTGTTGTTG
Internal bar code:TTATTTTATTATACGAAAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCAAATGCTGTCAACCG
Suggested primer 2:TCATGGAGGGATAACGGGGT