Insertion junction: CLIP2.007629_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007629
Chromosome:chromosome 3
Location:589878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145387 FAP239 Coiled-Coil Flagellar Associated Protein 239 5'UTR
Cre03.g145407 (1 of 2) IPR000571//IPR002110//IPR020683 - Zinc finger, CCCH-type // Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGGGGTTGTCCTACAGGTTGGCCGCTGCTTGTATGCCTTTCCGATGT
Internal bar code:ACTTGTAGGTGTTATGAGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGAAGTCGAGCACACTG
Suggested primer 2:ACTGCACGAGTGAGGAAAGG