Insertion junction: CLIP2.007641_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007641
Chromosome:chromosome 12
Location:1560463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487500 CGL61,NYE1, SGR1 Chlorophyll a dechelatase; (1 of 1) PTHR31750//PTHR31750:SF4 - FAMILY NOT NAMED // PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCTCCAGGAACCCCCTGCTGCGGTTGCTGCTGGTCCTCCTCAGGCT
Internal bar code:TTATATGCCAGTCGGATTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3793
LEAP-Seq percent confirming:88.0952
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGGAGCTTGACACGGTG
Suggested primer 2:GCCGTCTCTTCACTCCACTC