Insertion junction: CLIP2.007643_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007643
Chromosome:chromosome 4
Location:644291
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g217946 (1 of 1) PTHR22769:SF35 - NUDIX HYDROLASE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGAAATGTAGCTTGTTGGTCATGCCCTGTCACGCGCAGGCGCCGCC
Internal bar code:CTGTTTAAGGCTTGCTGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:662
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCTCCTCATACAGCTCG
Suggested primer 2:GGTGCTAACCTCGCTCTGTT