Insertion junction: CLIP2.007646_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007646
Chromosome:chromosome 16
Location:3074421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664350 CLD1 (1 of 1) PTHR10992//PTHR10992:SF752 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // ALPHA/BETA-HYDROLASE-LIKE PROTEIN; Putative Chlorophyll dephytylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGAAGGCGGCTGCACGGCTGCATGCGGTTGCATGATTGGAGTCTAGC
Internal bar code:GTGCATCGGTGTAGCGACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5606
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAAATGCAGGCCCTTCA
Suggested primer 2:GCCATCCATCTCTCTGCTCC