Insertion junction: CLIP2.007651_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007651
Chromosome:chromosome 6
Location:1940462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264550 CGL81 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAACACTCCACGTCAGCTTCCTTCTCCCCCTCTGCAGTTTAACACCCC
Internal bar code:GTTTACACATAGAGGGCGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2484
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGAGGTCTCTTCATCGC
Suggested primer 2:CATCAGATACCCCTCGGTGC