Insertion junction: CLIP2.007662_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007662
Chromosome:chromosome 7
Location:4656110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344702 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype 3'UTR
Cre07.g344771 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTGGCCAGTGCTAGCTAGAGTTATTTTTGCGTCTGGTATCTTTAGCA
Internal bar code:TGCCTTGTACGAAACGTAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1658
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCCAGTCCCCATCTGAT
Suggested primer 2:GTATGTGGGATGAGCGGGAG