Insertion junction: CLIP2.007666_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007666
Chromosome:chromosome 9
Location:1272152
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g400851 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCTGCTCGGACATCCGGCCAGGATGCCAGCGCAGCCGCCAGCTGCT
Internal bar code:AGGGCGGGATATATCTAACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:418
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCTCGCAACCGAACACT
Suggested primer 2:GGTGGGAAACGAAACAAGGC