Insertion junction: CLIP2.007667_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007667
Chromosome:chromosome 8
Location:3533579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379200 CPLD18 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR33471//PTHR33471:SF5 - FAMILY NOT NAMED // EXPRESSED PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGCTGGGCTGGGCGTCACTTGTTTCTTACTTCCCTTGCCCCTTCC
Internal bar code:GGGTTGGAACCTTCAGGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:406
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGAAACAGGGGACGGGG
Suggested primer 2:CCTGACAACTCTGCGTGACT