Insertion junction: CLIP2.007684_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007684
Chromosome:chromosome 2
Location:3631251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099850 PDC2 (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC; Pyruvate dehydrogenase, E1 component, alpha subunit 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCAGCGACGGAGGCCCACAGCAGCATGATCGTTGCAGCCTCTGCTAT
Internal bar code:TGGGAAGGGCCATCAACCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1656
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGGGCGACTTAGAGGTC
Suggested primer 2:CGCAGTCTGCTACGCAAATC