Insertion junction: CLIP2.007703_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007703
Chromosome:chromosome 1
Location:6195504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044150 (1 of 1) 2.1.1.181 - 23S rRNA (adenine(1618)-N(6))-methyltransferase / rRNA large subunit methyltransferase F 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCCTGGTCCCACGACCGGGCACGCCTCGAAACCATCACTGATGCCCG
Internal bar code:CGCCCAATAATAACCTGTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3890
LEAP-Seq percent confirming:41.9355
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTAAAGCGCCCAACTGC
Suggested primer 2:AGTAGCAGCCTGAGCAGTTG