Insertion junction: CLIP2.007739_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007739
Chromosome:chromosome 6
Location:6890465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296600 RFS1 Riboflavin synthase; (1 of 1) 2.5.1.9 - Riboflavin synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGCAGGCCGTGGCGCATTTGGGCGTAGGAGTTGGAGGCCACACGGC
Internal bar code:AGGAGAATATCGATACGTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2383
LEAP-Seq percent confirming:52.8302
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATGACGCATACTGTTG
Suggested primer 2:CAAACAGCATGCAGTCCCTG