Insertion junction: CLIP2.007754_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007754
Chromosome:chromosome 16
Location:1931616
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g656100 (1 of 1) PF07444 - Ycf66 protein N-terminus (Ycf66_N) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGCTGCTGTGGCGGCTGCGTCGGCAGGATGGGGTTGCCGTAATAG
Internal bar code:CGAGTGGTGAATCCCGGAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:319
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGTTGGCCTGCAACAG
Suggested primer 2:CTGCAGCCTCCAAACAACAC