Insertion junction: CLIP2.007755_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007755
Chromosome:chromosome 5
Location:3190870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232150 GDH2 Glutamate dehydrogenase; (1 of 1) 1.4.1.2//1.4.1.3 - Glutamate dehydrogenase / Glutamic dehydrogenase // Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAAAGTAGGGGACACGGAATAGAGGAGACCGCCTCTCACTGAGTGGGA
Internal bar code:ATCATCGCAAGCATCGAATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCCCCAAACACTCCACG
Suggested primer 2:GCGCTGTCTACCGTACCTAC