Insertion junction: CLIP2.007771_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007771
Chromosome:chromosome 7
Location:2195488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327150 (1 of 2) IPR001810//IPR003347 - F-box domain // JmjC domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCGTGCGCACTTTCAGGAGCACAATGAAGTACTTACAATACTGATG
Internal bar code:CTGTTGTCGGTAATGTTGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1307
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTCGCTGTGTTTGTACT
Suggested primer 2:GATTCTGTGGGGTGGAAGGG