Insertion junction: CLIP2.007775_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007775
Chromosome:chromosome 12
Location:2040587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510400 RBD4,CPLD30 Conserved in the Plant Lineage and Diatoms; (1 of 4) IPR024934 - Rubredoxin-like domain 3'UTR
Cre12.g801374 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAGTCGGCCACGCAAGCGCTGCCCGCTGAAGTGCATATGTTTTGGAG
Internal bar code:CACATCTAGAACAGGAGCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3123
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGAGGCGATCACCTTT
Suggested primer 2:GGGACTCCACATCACTTGGG