Insertion junction: CLIP2.007776_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007776
Chromosome:chromosome 16
Location:6656581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673550 CGLD36 (1 of 1) 2.7.1.100//5.3.1.23 - S-methyl-5-thioribose kinase / MTR kinase // S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase; 5-methyl thioribose kinase-related protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAAATCCGAAGCGCCTAACACTTCAACAAACAGTTGCTTCCTTATGAA
Internal bar code:ATTTTTAAGTTGTAGATGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2245
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGTCAAGACCTCCCTCCA
Suggested primer 2:TGTGAGGAGGATGGAGGAGG