Insertion junction: CLIP2.007807_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007807
Chromosome:chromosome 4
Location:3470974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227800 (1 of 1) IPR001480//IPR018392 - Bulb-type lectin domain // LysM domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTAGACCAGCTGCAGCAGGACCCTAGCTCTGGCGGCAGCGCACCGGGC
Internal bar code:CCTGTCACGCACAGACCGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGCACACCAGGACCACA
Suggested primer 2:GTGGCAATGGTAACGCTGAG