Insertion junction: CLIP2.007808_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007808
Chromosome:chromosome 9
Location:2217568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395200 (1 of 1) PF04087 - Domain of unknown function (DUF389) (DUF389) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGAAAGTTTGGCGATGTGGCAATGTGGTCGCCCACGGTCCGCCGTGTA
Internal bar code:ATCAGCGGAGTGAGTGCCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:193
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCTGCCCCACACCATTG
Suggested primer 2:CCAGCGCGCCAAGTATAGTA