Insertion junction: CLIP2.007819_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007819
Chromosome:chromosome 17
Location:2023522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710850 TPT4,TPT29 UDP-xylose transporter; (1 of 4) K15285 - solute carrier family 35, member E3 (SLC35E3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCAATGCGTCGCGCGCGGAGACAAAAGGATGCCGTCAAGCATGTGG
Internal bar code:GGCTAATGTCAATCGCTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1029
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATCGCATTACGCTTTCA
Suggested primer 2:GCCTCAACGCGTTTGAAGTT