Insertion junction: CLIP2.007820_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007820
Chromosome:chromosome 13
Location:1873199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575500 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGAAGACCACTGGGCATGGGCTGCAGGAAAACACACACAGTCGCTCGT
Internal bar code:GAGTGATACGGTACTTCGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:648
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTAGTCACCCGCTGAA
Suggested primer 2:CCAACAGCTTGATGACGCAG