Insertion junction: CLIP2.007823_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007823
Chromosome:chromosome 2
Location:5213363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112250 CAL2 (1 of 1) 3.4.22.53//3.4.22.54 - Calpain-2 / Milli-calpain // Calpain-3 / Muscle-specific calcium-activated neutral protease 3; Calpain family cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCATTGTGCCCAGGGGCGCCGTTGAGTGTGCCGCCATCCGCCTGTGGC
Internal bar code:TCATGGACCTGGGCGTCGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1490
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTCGCTCGCTCTTTGT
Suggested primer 2:CGCAACGGTGATGCATACTG