Insertion junction: CLIP2.007824_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007824
Chromosome:chromosome 1
Location:1481402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007901 (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGAACATGTTTGCACCAGTGAAGGAGGTGCACCTATTGCGTAAGTCT
Internal bar code:ACGTTTTTTGATAGTATTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:86.4865
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCACTGCCCTAACCTTG
Suggested primer 2:TGTTGCCAGGTGTGTGTCTT