Insertion junction: CLIP2.007831_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007831
Chromosome:chromosome 9
Location:4402061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400441 (1 of 1) K11323 - histone arginine demethylase JMJD6 [EC:1.14.11.-] (JMJD6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCTGTCCTGACCGGCCGCCCACGCACCCACCTGCCCGCTCCTCGCCA
Internal bar code:TGTACCGGGCACGGAAGTAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:168
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCCCTTTCACTGTCAC
Suggested primer 2:GTGACAAATGAAGCCTCGCC