Insertion junction: CLIP2.007837_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007837
Chromosome:chromosome 16
Location:798233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801882 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGGCCAGGTGCGCGGGCGTCTGGGCGGAGGGCTCAAGACTTAGATGG
Internal bar code:GAGACACTGGGTAGATCTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1622
LEAP-Seq percent confirming:76.0563
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTCTGCACCGTGTACGT
Suggested primer 2:TTTGACGTCAAGGAGGACCG