Insertion junction: CLIP2.007838_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007838
Chromosome:chromosome 12
Location:5197406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527100 (1 of 1) IPR002048//IPR003439//IPR003593//IPR027417 - EF-hand domain // ABC transporter-like // AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCGTGTGCCACCTCCCACCCCTTGCATTCCCACCCCGCCCTAATGT
Internal bar code:CGCTTTGTTACTCGGCGGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTACTGTGGGATGGGGAT
Suggested primer 2:CCTGCAGCCAAAATCGTAGC