Insertion junction: CLIP2.007847_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007847
Chromosome:chromosome 17
Location:5801104
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741300 SAK1 Regulator of acclimation to singlet oxygen intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGCATATGGCAGCACGCCATTGCACAGCTGCTCCCACCTTCCTCGG
Internal bar code:GCGAAGCGGTTGCCAGGAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2021
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGATATTGTTGCTGCTGG
Suggested primer 2:ACTCCTGAGCTGTCCTTTGC