Insertion junction: CLIP2.007852_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007852
Chromosome:chromosome 3
Location:254597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144344 (1 of 1) IPR003613//IPR011009//IPR013083//IPR013320 - U box domain // Protein kinase-like domain // Zinc finger, RING/FYVE/PHD-type // Concanavalin A-like lectin/glucanase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGGGCTGGGCAGGGGCTAAAC
Internal bar code:CGTACACCGGATTCACTTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:772
LEAP-Seq percent confirming:23.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AATGAGCGAGGAACGTGGAG
Suggested primer 2:TGTAGGAGAGGACGGGAAGG