Insertion junction: CLIP2.007852_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007852
Chromosome:chromosome 3
Location:254599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144344 (1 of 1) IPR003613//IPR011009//IPR013083//IPR013320 - U box domain // Protein kinase-like domain // Zinc finger, RING/FYVE/PHD-type // Concanavalin A-like lectin/glucanase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
Internal bar code:CGTACACCGGATTCACTTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1791
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGGAGAGGACGGGAAGG
Suggested primer 2:AATGAGCGAGGAACGTGGAG