Insertion junction: CLIP2.007853_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007853
Chromosome:chromosome 7
Location:2620634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330300 (1 of 2) K14411 - RNA-binding protein Musashi (MSI) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGGTCGGTCCGCGAGGCCTTTGTCTCTTACAACCGCAACAACGGACG
Internal bar code:AACGAATGTGGGGTGATGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2036
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TAATAGCTGCCCTGCATCCG
Suggested primer 2:CGCGCACATGATGACTGAAG