Insertion junction: CLIP2.007854_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007854
Chromosome:chromosome 3
Location:2720404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800310 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGCCGGCGGCAGCACGGCATCGCATGCGCCTGGACAACCCGGCAG
Internal bar code:CCTGATATGTACAAGGTCAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTGACTGTAAGCGTGCT
Suggested primer 2:AATCAGCTTCTTGGTGCCGA