Insertion junction: CLIP2.007854_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007854
Chromosome:chromosome 3
Location:2720406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800310 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAACAGTTGAAAAATGCTTGGTGGCATGTTTAAGTCAGACCTGGGGC
Internal bar code:GATAAATAGTAGGTCATGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2488
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AATCAGCTTCTTGGTGCCGA
Suggested primer 2:TCGTTGACTGTAAGCGTGCT