Insertion junction: CLIP2.007865_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007865
Chromosome:chromosome 12
Location:2513824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00076030

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAACAACACAGCGCCCAGCCACGGCCCGCAGCTAGTGAGCGCACCTTG
Internal bar code:TGGATTTGAACCAAACAGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:55.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AATCACGCTTGTCCCTCAGG
Suggested primer 2:GCCATATCACGACAACGCAC