Insertion junction: CLIP2.007874_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007874
Chromosome:chromosome 7
Location:5032387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00101451

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAAAGTAGAATAATTCTCATTTAGTCTACCCCTATTTTGTAGAAGAC
Internal bar code:CCCGCTTTAATAACAGGGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2885
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTTGCATTGACTGGTGT
Suggested primer 2:ATGACTGTCGTAGCGCTAGC