Insertion junction: CLIP2.007888_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007888
Chromosome:chromosome 8
Location:3558108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGCAACGCCCAGAAGCAGCCCCGGCGCAGCGAGGCCCAGCTCCGGGT
Internal bar code:AGTGGCGGACGCCCATGGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:810
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGCCGCTGTTGTTGTTG
Suggested primer 2:AAAAGGCTACATCCCTGGCC