Insertion junction: CLIP2.007891_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007891
Chromosome:chromosome 10
Location:2318577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434400 PF6 (1 of 1) K19090 - CRISPR-associated protein Cas5t (cas5t); Flagellar central pair-associated protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCCGAAGACTCTCCCGGTTGGGATGCAGTGTCGGAGGTGCTGAAA
Internal bar code:TTTCTGCGTTTTGTGTGCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2743
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGTAGTAGCCCAGGTTG
Suggested primer 2:TTCCGCTGGTTGAGGCTAAG