Insertion junction: CLIP2.007896_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007896
Chromosome:chromosome 7
Location:6458920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre40.g760147 (1 of 1) PTHR10877//PTHR10891 - POLYCYSTIN-RELATED // EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTACATTATCCACGTGTTACTGGAAAGGCCTTAAGATTGCCTGTAGA
Internal bar code:ACTTTGAGCTCATCGCAGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2116
LEAP-Seq percent confirming:58.5366
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCAAGCGCTTTGACAA
Suggested primer 2:CCGTACAGGTGTGTCCCTTC