Insertion junction: CLIP2.007898_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.007898
Chromosome:chromosome 12
Location:3546263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496400 (1 of 2) 2.7.7.52 - RNA uridylyltransferase / TUT intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATCTGCCAGCGGCTCAGCCTTGCCTTCTGTCTTTCATGGACGGCTAC
Internal bar code:TCTACTAATTGCACTAGCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:637
LEAP-Seq percent confirming:13.9535
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTCTTCCTCCATGCACT
Suggested primer 2:TTTAATCACCAGGACCGGCC