Insertion junction: CLIP2.007898_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007898
Chromosome:chromosome 12
Location:3546264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496400 (1 of 2) 2.7.7.52 - RNA uridylyltransferase / TUT intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATTTCCGCGTGCTTGCGGGCAAGGTTCGTATCCTTTTTGCAGCACCAC
Internal bar code:TTTGGGGTAGGGCTGGGTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4130
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAATCACCAGGACCGGCC
Suggested primer 2:CACGTCTTCCTCCATGCACT